fixed cmake file

reduced verbosity for missing atoms
update script, more cross platform

CMakeLists.txt

@@ -88,6 +88,7 @@ if(EXISTS "${CCP4}")
 		option(RECREATE_SYMOP_DATA "Recreate SymOp data table in case it is out of date" ON)
 		option(RECREATE_SYMOP_DATA "Recreate SymOp data table in case it is out of date" ON)
 	endif()
 	endif()
 else()
 else()
+	set(RECREATE_SYMOP_DATA OFF)
 	message("Not trying to recreate SymOpTable_data.hpp since CCP4 is not defined")
 	message("Not trying to recreate SymOpTable_data.hpp since CCP4 is not defined")
 endif()
 endif()
 
 

src/Structure.cpp

@@ -1053,7 +1053,7 @@ Atom Residue::atomByID(const std::string &atomID) const
 		}
 		}
 	}
 	}
 
 
-	if (not result and cif::VERBOSE)
+	if (not result and cif::VERBOSE > 1)
 		std::cerr << "Atom with atom_id " << atomID << " not found in residue " << mAsymID << ':' << mSeqID << std::endl;
 		std::cerr << "Atom with atom_id " << atomID << " not found in residue " << mAsymID << ':' << mSeqID << std::endl;
 
 
 	return result;
 	return result;

tools/update-dictionary-script.in

@@ -48,6 +48,6 @@ fetch_dictionary "@CIFPP_CACHE_DIR@/components.cif" "ftp://ftp.wwpdb.org/pub/pdb
 
 
 # notify subscribers
 # notify subscribers
 
 
-if [ -d /etc/libcifpp/cache-update.d ]; then
+if [ -d /etc/libcifpp/cache-update.d ] && [ -x /bin/run-parts ]; then
 	run-parts --arg "@CIFPP_CACHE_DIR@" -- /etc/libcifpp/cache-update.d
 	run-parts --arg "@CIFPP_CACHE_DIR@" -- /etc/libcifpp/cache-update.d
 fi
 fi