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pdbfixer
Commit 63d4d319 by Ruibin Liu Committed by GitHub
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Add nonstandard residue '5OW' to LYS (#258) 

https://www.rcsb.org/ligand/5OW is based on LYS and appears in PDB 5EIG.
parent 0c26d10b
Showing with 1 additions and 1 deletions
pdbfixer/pdbfixer.py
...@@ -65,7 +65,7 @@ else: ...@@ -65,7 +65,7 @@ else:
from cStringIO import StringIO from cStringIO import StringIO
substitutions = { substitutions = {
'2AS':'ASP', '3AH':'HIS', '5HP':'GLU', 'ACL':'ARG', 'AGM':'ARG', 'AIB':'ALA', 'ALM':'ALA', 'ALO':'THR', 'ALY':'LYS', 'ARM':'ARG', '2AS':'ASP', '3AH':'HIS', '5HP':'GLU', '5OW':'LYS', 'ACL':'ARG', 'AGM':'ARG', 'AIB':'ALA', 'ALM':'ALA', 'ALO':'THR', 'ALY':'LYS', 'ARM':'ARG',
'ASA':'ASP', 'ASB':'ASP', 'ASK':'ASP', 'ASL':'ASP', 'ASQ':'ASP', 'AYA':'ALA', 'BCS':'CYS', 'BHD':'ASP', 'BMT':'THR', 'BNN':'ALA', 'ASA':'ASP', 'ASB':'ASP', 'ASK':'ASP', 'ASL':'ASP', 'ASQ':'ASP', 'AYA':'ALA', 'BCS':'CYS', 'BHD':'ASP', 'BMT':'THR', 'BNN':'ALA',
'BUC':'CYS', 'BUG':'LEU', 'C5C':'CYS', 'C6C':'CYS', 'CAS':'CYS', 'CCS':'CYS', 'CEA':'CYS', 'CGU':'GLU', 'CHG':'ALA', 'CLE':'LEU', 'CME':'CYS', 'BUC':'CYS', 'BUG':'LEU', 'C5C':'CYS', 'C6C':'CYS', 'CAS':'CYS', 'CCS':'CYS', 'CEA':'CYS', 'CGU':'GLU', 'CHG':'ALA', 'CLE':'LEU', 'CME':'CYS',
'CSD':'ALA', 'CSO':'CYS', 'CSP':'CYS', 'CSS':'CYS', 'CSW':'CYS', 'CSX':'CYS', 'CXM':'MET', 'CY1':'CYS', 'CY3':'CYS', 'CYG':'CYS', 'CSD':'ALA', 'CSO':'CYS', 'CSP':'CYS', 'CSS':'CYS', 'CSW':'CYS', 'CSX':'CYS', 'CXM':'MET', 'CY1':'CYS', 'CY3':'CYS', 'CYG':'CYS',
......
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